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BioCreAtIvE Task 1A: Gene mention finding evaluation. BMC Bioinformatics 6(Suppl. 1), S2 (2005) 22. : Spade: An efficient algorithm for mining frequent sequences. Machine Learning 42(1/2), 31–60 (2001) 23. : Frontiers of biomedical text mining: current progress. Brief. Bioinform. S. S. Geological Survey National Earthquake Information Center, Reston, VA, USA Abstract. People in the locality of earthquakes are publishing anecdotal information about the shaking within seconds of their occurrences via social network technologies, such as Twitter.

CICLing 2009. LNCS, vol. 5449, pp. 406–417. Springer, Heidelberg (2009) 19. : Mining sequential patterns: Generalizations and performance improvements. , Gardarin, G. ) EDBT 1996. LNCS, vol. 1057, pp. 3–17. Springer, Heidelberg (1996) 20. : GENETAG: a tagged corpus for gene/protein named entity recognition. BMC Bioinformatics 6, 10 (2005) 21. : BioCreAtIvE Task 1A: Gene mention finding evaluation. BMC Bioinformatics 6(Suppl. 1), S2 (2005) 22. : Spade: An efficient algorithm for mining frequent sequences.

That step defines the items of the sequence database. The POS tagged text is then sliced in sequences (Step 2). The type of slice size (a sequence) can be for example the phrase, the whole sentence or the paragraph. Sequential pattern mining is then applied (Step 3) to find the frequent sequential patterns in the database. The patterns are then filtered with respect to user-defined constraints (Step 4). Method CheckConstrainsts prunes the sequential patterns that do not satisfy CG . Therefore, the constrainedPatterns set contains all frequent sequential patterns that satisfy CG .

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